cr_trig_parse_gmsh module

Parse a GMSH mesh and produce a FEM grid for CRMod/CRTomo. This script should not be called directly, as it requires the input and output files from “cr_trig_create.py”.

class cr_trig_parse_gmsh._line(p1, p2)

Bases: object

get_center()

Return (x,y) coordinate of central point

get_diff()

get_distance()

cr_trig_parse_gmsh.debug_plot_mesh(mesh, boundary_elements)

cr_trig_parse_gmsh.get_adj_bound_v1(mesh)

Determine triangular elements adjacent to the boundary elements

cr_trig_parse_gmsh.get_adj_bound_v2(mesh)

Determine triangular elements adjacent to the boundary elements

cr_trig_parse_gmsh.get_elements(mesh)

cr_trig_parse_gmsh.get_header(mesh)

For now we only know Element types 1 (line) and 2 (triangle)

cr_trig_parse_gmsh.get_nodes(mesh)

cr_trig_parse_gmsh.main()

cr_trig_parse_gmsh.parse_gmsh(filename, boundary_file)

Parse a GMSH .msh file and return a dictionary containing the data neccessary to create CRTomo grids

cr_trig_parse_gmsh.write_elec_file(filename, mesh)

Read in the electrode positions and return the indices of the electrodes

# TODO: Check if you find all electrodes